The detailed information of tRNA gene sequence


Sequence ID>C141000405
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 596598
End posion on genome 596507
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggagcggttc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTTGCCTGCTAAGCAAGTGTGGAGGTATTCCTC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtgcgtgccc
Secondary structure (Cloverleaf model)
>C141000405	Ser	GCT
                   c      GCCA gtgcgtgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGGAGGTATTCCTCCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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