The detailed information of tRNA gene sequence


Sequence ID>C141000406
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 596502
End posion on genome 596426
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ccgccagtgc
tRNA gene sequence 
GTGCCCGTAGCTCAGCTGGATAGAGCGCCAGACTGCGGATCTGGAGGCCGGGAGTTCAAA
TCTCCCCGGGCACGCCA
Downstream region at tRNA end position 
gtctcgaaaa
Secondary structure (Cloverleaf model)
>C141000406	Arg	GCG
                   c      GCCA gtctcgaaaa
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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