The detailed information of tRNA gene sequence


Sequence ID>C141002146
Genome IDCP003809
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesalpha proteobacterium HIMB5 [CP003809]
Start position on genome 650405
End posion on genome 650314
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttcttgt
tRNA gene sequence 
GGAGAGATGGGTGAGAGGCTGAAACCAGTCGTTTGCTAAATGACCGTGCGAGGAAACTTG
TACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaataaaga
Secondary structure (Cloverleaf model)
>C141002146	Ser	GCT
                   t      GCCA ttaataaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGAGGAAACTTGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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