The detailed information of tRNA gene sequence


Sequence ID>C141002553
Genome IDCP003911
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus B4 [CP003911, CP003912]
Start position on genome 5052723
End posion on genome 5052799
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtgccgaac
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGATGGAATCATAATCCACAGGTCCGCGGTTCGAG
TCCGTGAAGAGCCACCA
Downstream region at tRNA end position 
acattattga
Secondary structure (Cloverleaf model)
>C141002553	Met	CAT
                   c      ACCA acattattga
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T G
                    T     G T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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