The detailed information of tRNA gene sequence


Sequence ID>C09108147
Genome IDCP001196
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
Start position on genome 3106762
End posion on genome 3106688
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgtgccaat
tRNA gene sequence 
GCTCCCTTCGTCTAGCGGTTAGGACGCGGCCCTCTCAAGGCTGAAACACGAGTTCGATTC
TCGTAGGGAGCGCCA
Downstream region at tRNA end position 
atttcccctt
Secondary structure (Cloverleaf model)
>C09108147	Glu	CTC
                   t      GCCA atttcccctt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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