The detailed information of tRNA gene sequence


Sequence ID>C09111133
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 892233
End posion on genome 892157
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcagattcat
tRNA gene sequence 
GTCGTATTCGTCTAGTGGCTTAGGACGCAAGGTTTTCATCCTTGTAGACGCGGGTTCGAA
TCCCGCATACGACTCCA
Downstream region at tRNA end position 
catcgacatt
Secondary structure (Cloverleaf model)
>C09111133	Glu	TTC
                   t      TCCA catcgacatt
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      T T A        G     TAGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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