The detailed information of tRNA gene sequence


Sequence ID>C141004751
Genome IDCP006272
Search identical group
Phylum/ClassActinomycetota
SpeciesActinoplanes friuliensis DSM 7358 [CP006272]
Start position on genome 6078117
End posion on genome 6078024
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtgatcacc
tRNA gene sequence 
GGAGGCGTTCAGGTGGCTGGTGCCCCTCCCGGTCTTCAAAACCGGTGTGGCCCGGTATCC
GGGCCGGGCGGGTTCGATTCCCGTCCGCCTCCGCtt
Downstream region at tRNA end position 
tccagctcct
Secondary structure (Cloverleaf model)
>C141004751	SeC	TCA
                   c      GCtt tccagctcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        C      + | | | |     G
    T       T G G A       G C G G G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGTGGCCCGGTATCCGGGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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