The detailed information of tRNA gene sequence


Sequence ID>C141005670
Genome IDCP006616
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAnaplasma phagocytophilum str. HZ2 [CP006616]
Start position on genome 48972
End posion on genome 49045
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gagtggtttt
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGTAGAGCATCTGTTTTGCACACAGAAGGTCAGCGGTTCGACC
CCGCTTGCCTCCACat
Downstream region at tRNA end position 
ttccggctct
Secondary structure (Cloverleaf model)
>C141005670	Ala	TGC
                   t      ACat ttccggctct
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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