The detailed information of tRNA gene sequence


Sequence ID>C141006114
Genome IDCP006644
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sanxanigenens DSM 19645 = NX02 [CP006644]
Start position on genome 5495948
End posion on genome 5495863
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acccgtctca
tRNA gene sequence 
GGAGGGTGGCGCGCAGTGGTGTGCAACCGGTCTCGAAAACCGGGCTAACCTAACGGTTAA
GGGTTCGACTCCTTCACCCTCCGCCA
Downstream region at tRNA end position 
tgttcaggag
Secondary structure (Cloverleaf model)
>C141006114	Ser	CGA
                   a      GCCA tgttcaggag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    G     C T T C C     A
      G A C        G        | + | |     G
    T       G C G C       A A G G G     C
    G       + | |                   T T
    G       T G C A
      T G          A     GCTAACCTAACGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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