The detailed information of tRNA gene sequence


Sequence ID>C141006336
Genome IDCP006650
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus aminophilus JCM 7686 [CP006650]
Start position on genome 3601806
End posion on genome 3601711
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccaaacagaa
tRNA gene sequence 
GGAAGAGATTCAGCCCCGGTGGGTTGGCCGGACTTCAAATCCGGTTGGGGCAGCGAGCCT
GTCCCGGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
atatcttgaa
Secondary structure (Cloverleaf model)
>C141006336	SeC	TCA
                   a      GCCA atatcttgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       C G A C       G T G G G     C
    G       | + | |                 T T
    T       G T T G
      G G          G     TTGGGGCAGCGAGCCTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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