The detailed information of tRNA gene sequence


Sequence ID>C141010459
Genome IDCP006900
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea pnomenusa 3kgm [CP006900]
Start position on genome 5430646
End posion on genome 5430722
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gatctaagtc
tRNA gene sequence 
GGGTCTGTAGCTCAGGTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGAAGGTTCAAG
TCCTTCCAGACCCACCA
Downstream region at tRNA end position 
agcttaacca
Secondary structure (Cloverleaf model)
>C141010459	Ile	GAT
                   c      ACCA agcttaacca
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C T T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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