The detailed information of tRNA gene sequence


Sequence ID>C141010487
Genome IDCP006912
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium nitrativorans NL23 [CP006912]
Start position on genome 1428339
End posion on genome 1428429
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaccgatcc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAATCGTTATACCCCTAAAGGGT
ATCAGGGGTTCGAATCCCCTCGTCTCCGCCA
Downstream region at tRNA end position 
actgttaccc
Secondary structure (Cloverleaf model)
>C141010487	Ser	GCT
                   c      GCCA actgttaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACCCCTAAAGGGTATC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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