The detailed information of tRNA gene sequence


Sequence ID>C141011343
Genome IDCP006996
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus pyridinivorans SB3094 [CP006996]
Start position on genome 82978
End posion on genome 83072
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggtgagcgc
tRNA gene sequence 
GGAGGTGGTTCTCGTCTGGTGACGGTCGCGGTCTTCAAAACCGTTGTGGCCCAGTATCTG
GGCTGGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
aaagttttcg
Secondary structure (Cloverleaf model)
>C141011343	SeC	TCA
                   c      GCCA aaagttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T T
                    T     T G C C C     A
      T C T        T      + | | | |     G
    G       G C T C       G C G G G     C
    G       | | +                   T T
    T       C G G T
      G A          C     TGTGGCCCAGTATCTGGGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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