The detailed information of tRNA gene sequence


Sequence ID>C141011678
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 594082
End posion on genome 594171
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcttcgtta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCTTGCTAAGGAGTTGTAGGGTTTACAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatccgtttc
Secondary structure (Cloverleaf model)
>C141011678	Ser	GCT
                   a      Gttt aatccgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTTACAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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