The detailed information of tRNA gene sequence


Sequence ID>C141011683
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 1166871
End posion on genome 1166964
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatattagta
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCAGCACTGGAAATGCTGTGTGCGGGTTAAACCC
CGCACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaagctatg
Secondary structure (Cloverleaf model)
>C141011683	Ser	GGA
                   a      GCCA aaaagctatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGTTAAACCCCGCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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