The detailed information of tRNA gene sequence


Sequence ID>C141011685
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 1256313
End posion on genome 1256396
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tatatcctta
tRNA gene sequence 
GCCGGAGTGGCGGAACTGGCAGACGCGGGAGATTCAAAATCTCCTGCCCGCAAGGGCGTG
GGGGTTCGAATCCCTCCTCCGGCAtaa
Downstream region at tRNA end position 
aaaaaaaacg
Secondary structure (Cloverleaf model)
>C141011685	Leu	CAA
                   a      Ataa aaaaaaaacg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGCCCGCAAGGGCGT
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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