The detailed information of tRNA gene sequence


Sequence ID>C141011691
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 1475548
End posion on genome 1475625
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataactttga
tRNA gene sequence 
GGAGCCGTAGTTCAGCCAGGTCAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAA
GTCCCGTCGGCTCCGCCA
Downstream region at tRNA end position 
ctcactttct
Secondary structure (Cloverleaf model)
>C141011691	Asp	GTC
                   a      GCCA ctcactttct
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
    C C G A        A      + | | | |     A
  A         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    T C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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