The detailed information of tRNA gene sequence


Sequence ID>C141011692
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 1474019
End posion on genome 1473932
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctctcctgta
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGCCGAACGGGGCGGTTTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGGGGGTTCGAATCCCTCCCTCGCCGtaa
Downstream region at tRNA end position 
aaggtttaac
Secondary structure (Cloverleaf model)
>C141011692	Ser	CGA
                   a      Gtaa aaggtttaac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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