The detailed information of tRNA gene sequence


Sequence ID>C141011694
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 1433853
End posion on genome 1433781
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatattatca
tRNA gene sequence 
CGGGGTGTAGCTCAGGTGGTAGAGCGCTGGCTTTGGGAGCCAGAGGTCGCAGGTTCAAGT
CCTGTCGCCCCGAggg
Downstream region at tRNA end position 
cccgtagctc
Secondary structure (Cloverleaf model)
>C141011694	Pro	TGG
                   a      Aggg cccgtagctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T G T C C     A
      G G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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