The detailed information of tRNA gene sequence


Sequence ID>C141011702
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 779559
End posion on genome 779483
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tatcaattgt
tRNA gene sequence 
GCCCCCGTCGTCTAGCCCGGTCAAGGACACCGCCCTTTCAAGGCGGAGAACGCGGGTTCA
AATCCCGCCGGGGGTGCtt
Downstream region at tRNA end position 
aaaaaacacc
Secondary structure (Cloverleaf model)
>C141011702	Glu	TTC
                   t      GCtt aaaaaacacc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       G C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C A A        A     AGAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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