The detailed information of tRNA gene sequence


Sequence ID>C141011704
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 659878
End posion on genome 659805
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cccgctcttA
tRNA gene sequence 
GGCAACGTGGCCGAGTGGCTAGGCGAGGGACTGCAAATCCCTTCTACGGCGGTTCGAATC
CGCCCGTTGCCTTaa
Downstream region at tRNA end position 
gaaaaatcca
Secondary structure (Cloverleaf model)
>C141011704	Cys	GCA
                   A      TTaa gaaaaatcca
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        G     TCTAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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