The detailed information of tRNA gene sequence


Sequence ID>C141011716
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 24062
End posion on genome 23987
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttatcgtaag
tRNA gene sequence 
GAGGGTGTAGCTCAGTTGGTAGAGCAGTGGACTGTGGATCCACGGGTCGCGGGTTCGAGT
CCCGTCACCCTCCCCA
Downstream region at tRNA end position 
ccatcaaagg
Secondary structure (Cloverleaf model)
>C141011716	His	GTG
                   g      CCCA ccatcaaagg
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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