The detailed information of tRNA gene sequence


Sequence ID>C141012166
Genome IDFO681348
Search identical group
Phylum/ClassMycoplasmatota
SpeciesParacholeplasma brassicae O502 [FO681348]
Start position on genome 1177291
End posion on genome 1177198
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caaaagttac
tRNA gene sequence 
GGAAGAATACCCAAGTCCGGCTGAAGGGTCTGGCCTCGAAAACCAGTAGGACGTTAATCG
CGTCGCAGGGGTTCAAATCCCCTTTCTTCCGCCA
Downstream region at tRNA end position 
tataacaagc
Secondary structure (Cloverleaf model)
>C141012166	Ser	CGA
                   c      GCCA tataacaagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T          T A
                    T     T C C C C     A
    C T G A        A      | | | | |     A
  C         A C C C       A G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        T     TAGGACGTTAATCGCGTCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C   A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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