The detailed information of tRNA gene sequence


Sequence ID>C141012342
Genome IDHE774682
Search identical group
Phylum/ClassBacteroidota
SpeciesFlavobacterium indicum GPTSA100-9 = DSM 17447 [HE774682]
Start position on genome 1827868
End posion on genome 1827783
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acggattata
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTTCTCCGCtg
Downstream region at tRNA end position 
aaaaaaatcc
Secondary structure (Cloverleaf model)
>C141012342	Ser	TGA
                   a      GCtg aaaaaaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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