The detailed information of tRNA gene sequence


Sequence ID>C143000058
Genome IDCP006259
Search identical group
Phylum/ClassActinomycetota
SpeciesStreptomyces collinus Tu 365 [CP006259]
Start position on genome 951042
End posion on genome 951135
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtcgagcggt
tRNA gene sequence 
GGAGGCGTGTGGGTGCCTGGTGGCCCTCCCGGTCTTCAAAACCGAGGTGTCCGAGGATCT
CGGGCAGGCGGGTTCGATTCCCGTCCGCCTCCGCtc
Downstream region at tRNA end position 
cccccaccgg
Secondary structure (Cloverleaf model)
>C143000058	SeC	TCA
                   t      GCtc cccccaccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    G     T G C C C     A
      C C G        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | +                 T T
    G       C C C T
      T G G        C     GGTGTCCGAGGATCTCGGGCAG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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