The detailed information of tRNA gene sequence


Sequence ID>PHG14100825
Genome IDHQ993494
Search identical group
Phylum/ClassSiphoviridae
SpeciesEscherichia phage phiEC2447stx2c Wee (HQ993494)
Start position on genome 1621
End posion on genome 1697
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tctgcacact
tRNA gene sequence 
GCGTTGTTAGCTCAGCCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGGTTCGAA
TCCAGTACAACGCGCCA
Downstream region at tRNA end position 
tatttattta
Secondary structure (Cloverleaf model)
>PHG14100825	Arg	TCT
                   t      GCCA tatttattta
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     CGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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