The detailed information of tRNA gene sequence


Sequence ID>PHG14100843
Genome IDHQ993501
Search identical group
Phylum/ClassSiphoviridae
SpeciesEscherichia phage phiEC3198stx2c Wee (HQ993501)
Start position on genome 1448
End posion on genome 1523
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctgcgccc
tRNA gene sequence 
GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT
CCAGCAAGGGCCACCA
Downstream region at tRNA end position 
tcacataccg
Secondary structure (Cloverleaf model)
>PHG14100843	Met	CAT
                   c      ACCA tcacataccg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      G A          G     AGGTC
                    A   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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