The detailed information of tRNA gene sequence


Sequence ID>C09107627
Genome IDCP001510
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens AM1 [CP001510]
Start position on genome 3116046
End posion on genome 3115970
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cccctcacgt
tRNA gene sequence 
GCCGCCGTAGCTCAGTTGGTTAGAGCACTAGATTGTGGATCTAGGGGTCCCCCGTTCGAG
CCGGGGCGGTGGTACCA
Downstream region at tRNA end position 
tcgaatttcg
Secondary structure (Cloverleaf model)
>C09107627	His	GTG
                   t      ACCA tcgaatttcg
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     G - C          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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