The detailed information of tRNA gene sequence


Sequence ID>PHG14101702
Genome IDJX100811
Search identical group
Phylum/ClassSiphoviridae
SpeciesCaulobacter virus Karma Lu11 (JX100811)
Start position on genome 50288
End posion on genome 50375
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccaccaacac
tRNA gene sequence 
GGTAGGTTGGCTGAGAGGCCGAAGGCGCCCGTTTCGAAAACGGGAGAACCGCAAGGTTCC
GTGGGTTCGAATCCCACACCTACCTCCA
Downstream region at tRNA end position 
acatggatgt
Secondary structure (Cloverleaf model)
>PHG14101702	Ser	CGA
                   c      TCCA acatggatgt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      C G A        G     AGAACCGCAAGGTTCC
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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