The detailed information of tRNA gene sequence


Sequence ID>PHG14101709
Genome IDJX100811
Search identical group
Phylum/ClassSiphoviridae
SpeciesCaulobacter virus Karma Lu11 (JX100811)
Start position on genome 52635
End posion on genome 52712
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gctgccatcc
tRNA gene sequence 
GCGCGGGTAGCTCAATGGACCCAGAGCAGCCGTCTTCTACACGGTGGGTTGGGGGTTCGA
ATCCCTCCCCGTGCGCCA
Downstream region at tRNA end position 
aacttgacag
Secondary structure (Cloverleaf model)
>PHG14101709	Arg	TCT
                   c      GCCA aacttgacag
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G T A A        A      | + | | |     G
  G         C T C G       G G G G G     C
  A         | | | |                 T T
  C         G A G C
    C C A          A     GGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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