The detailed information of tRNA gene sequence


Sequence ID>PHG14101710
Genome IDJX100811
Search identical group
Phylum/ClassSiphoviridae
SpeciesCaulobacter virus Karma Lu11 (JX100811)
Start position on genome 104351
End posion on genome 104429
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttacagaa
tRNA gene sequence 
CGCGGGGTAGAGGAGTCCGGTTGTCCTCGTCTGGCTCATAACCAGGAGATCGTGGGTTCA
AATCCCACTCCCGCTCCCA
Downstream region at tRNA end position 
atgcgaacgc
Secondary structure (Cloverleaf model)
>PHG14101710	Met	CAT
                   a      CCCA atgcgaacgc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     A
  C         G G A G       G T G G G     C
  G         | | | |                 T T
  G         C C T C
    T T G T        G     AGATC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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