The detailed information of tRNA gene sequence


Sequence ID>PHG14101769
Genome IDJX100814
Search identical group
Phylum/ClassSiphoviridae
SpeciesCaulobacter virus Rogue Lu11 (JX100814)
Start position on genome 102260
End posion on genome 102172
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcccgtttt
tRNA gene sequence 
GCTACGGTGGTCCGAGAGGTTAGGCGCGGGACTGCAAATCTCTGCTGGTGGCGACACCTA
TGAGGGTTCGAGTCCCTCCCGTAGCTCCA
Downstream region at tRNA end position 
gaatttgaaa
Secondary structure (Cloverleaf model)
>PHG14101769	Cys	GCA
                   t      TCCA gaatttgaaa
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      G A G        G      | | | | |     G
    A       C C T G       G A G G G     C
    G         | + |                 T T
    G       A G G C
      T T          G     GCTGGTGGCGACACCTAT
                    C   T
                    G - C
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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