The detailed information of tRNA gene sequence


Sequence ID>PHG14102108
Genome IDKC292022
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HRTV-5 Gb1 (KC292022)
Start position on genome 2936
End posion on genome 3007
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taggtagttc
tRNA gene sequence 
AGGGCTTTGGTGTAGTGGTTATCATCGGGCGTTTGGGACGCTCGGAGGCCGGTTCGATTC
CGGCAGGCCCTAtct
Downstream region at tRNA end position 
tttttactga
Secondary structure (Cloverleaf model)
>PHG14102108	Pro	TGG
                   c      Atct tttttactga
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A          T T
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T G T G       G C C G G     C
    G         | | +                 T T
    T       T C A T
      T A          C     GGAG
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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