The detailed information of tRNA gene sequence


Sequence ID>PHG14102111
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 53420
End posion on genome 53348
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
gtacgcaatt
tRNA gene sequence 
GGGCGATTGGTCTACTGGATATGACACATCCCTGCGAAGGATGAGAAGGGAGTTCGATTC
TCTCATTGCCCACtc
Downstream region at tRNA end position 
tcccattata
Secondary structure (Cloverleaf model)
>PHG14102111	Arg	GCG
                   t      ACtc tcccattata
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     A - T
                     T - A          T T
                    T     C T C T C     A
      T C A        G      | + | | |     G
    G       T C T G       G G G A G     C
    G         | | |                 T T
    A       T G A C
      T A          A     AGAA
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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