The detailed information of tRNA gene sequence


Sequence ID>PHG14102115
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 50271
End posion on genome 50195
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cgggagactt
tRNA gene sequence 
GGGCTGATGGCGAAACTTGGCTAAACGCGGAAGGCTCTTGACCTTCTACATACGGGTTCA
AATCCTGTTCAGCCCACtc
Downstream region at tRNA end position 
ccgacgttga
Secondary structure (Cloverleaf model)
>PHG14102115	Lys	CTT
                   t      ACtc ccgacgttga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     T G T C C     A
    T C A A        G      | | + | |     A
  T         A G C G       A C G G G     C
  G           | | |                 T T
  G         A C G C
    C T A A        G     TACAT
                    G - C
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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