The detailed information of tRNA gene sequence


Sequence ID>PHG14102116
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 50194
End posion on genome 50107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcagcccacT
tRNA gene sequence 
CCCGACGTTGAGCAGTCTGGCTATGCTCGGCAGGCTCATATCCTGTTGTGCTTCGCACGA
AATGGGTTCGAATCCCATCGTCGGAATac
Downstream region at tRNA end position 
gtacttccgt
Secondary structure (Cloverleaf model)
>PHG14102116	Met	CAT
                   T      ATac gtacttccgt
                     C   A
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C T G A        T      | | | | |     G
  T         C G A G       A T G G G     C
  G         | | | |                 T T
  G         G C T C
    C T A T        G     TGTGCTTCGCACGAA
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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