The detailed information of tRNA gene sequence


Sequence ID>PHG14102118
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 49029
End posion on genome 48954
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gaccggattA
tRNA gene sequence 
TCCGTTGTGGCCCAATTTGGACGGGCACTCGCCTCGTAAGCGAGAGGTTGTGGGTTCGAT
TCCCACCAGCGGATTta
Downstream region at tRNA end position 
tccagtatgg
Secondary structure (Cloverleaf model)
>PHG14102118	Thr	CGT
                   A      TTta tccagtatgg
                     T - A
                     C - G
                     C - G
                     G - C
                     T + G
                     T - A
                     G - C          T T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       C C C G       G T G G G     C
    T       | | | |                 T T
    G       G G G C
      G A C        A     AGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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