The detailed information of tRNA gene sequence


Sequence ID>PHG14102120
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 48876
End posion on genome 48804
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ctggatttgc
tRNA gene sequence 
GGGCCGGTGGCGAAATGGCTTAACGCAGGAGGCTTTTAACCTCCCATCGCGGGTTCGATT
CCTGCTCGGCCCAtta
Downstream region at tRNA end position 
aatcgaaaga
Secondary structure (Cloverleaf model)
>PHG14102120	Lys	TTT
                   c      Atta aatcgaaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     C G T C C     A
      T A A        G      | | + | |     G
    G       A G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      T T A        A     CATC
                    G - C
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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