The detailed information of tRNA gene sequence


Sequence ID>PHG14102127
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 42840
End posion on genome 42770
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actattacgc
tRNA gene sequence 
TGGCTGGTGGTCCAATGGTACGATTCGGCGTTTGGGACGCCGAGATATGGGTTCGACTCC
CTTCCAGCCAAttc
Downstream region at tRNA end position 
acgcacgggt
Secondary structure (Cloverleaf model)
>PHG14102127	Pro	TGG
                   c      Attc acgcacgggt
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T C
                    T     T T C C C     A
        A A        G      |   | | |     G
      T     C C T G       A T G G G     C
      G       | | +                 T T
      G     C G A T
        T A        T     AGAT
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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