The detailed information of tRNA gene sequence


Sequence ID>C09300050
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 142864
End posion on genome 142794
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taaaacggca
tRNA gene sequence 
GCGGCTGTAGCTTAAGGGCAGAGCTTAAGAGTGTGGATCTTAAGATGGCGATTCAAGCTC
GCCCAGCCGTAgcc
Downstream region at tRNA end position 
tgcgctatct
Secondary structure (Cloverleaf model)
>C09300050	His	GTG
                   a      Agcc tgcgctatct
                     G + T
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     C C G C T     A
        A A        A      | | | | |     A
      G     T T C G       G G C G A     C
      G     + | | |                 T T
      G     G A G C
        C A        T     AGAT
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  G       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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