The detailed information of tRNA gene sequence


Sequence ID>C09102623
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 123515
End posion on genome 123441
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggcgcgtttT
tRNA gene sequence 
GGGCTTGTGGTTTAGAGGTCAGAACGTGCGCTTGATGAGCGCAAAGCCAGCAGTTCAAAT
CTGCTCAAGCCTAAaa
Downstream region at tRNA end position 
gcgcgcggcg
Secondary structure (Cloverleaf model)
>C09102623	Ile	GAT
                   T      AAaa gcgcgcggcg
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T C G T C     A
      A G A        G      | | | | |     A
    G       T T T G       A G C A G     C
    G       + | | |                 T T
    T       G A A C
      C A          G     AAGCC
                    T - A
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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