The detailed information of tRNA gene sequence


Sequence ID>W1910547268
Genome IDFZNQ01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 8998
End posion on genome 8927
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gatcggatgc
tRNA gene sequence 
GGGCTCGTAGATCAGCGGCAGATCGCTTCCTTCGCAAGGAAGAGGCCCGGGGTTCAAATC
CCCGCGAGTCCAtcg
Downstream region at tRNA end position 
cgatttctct
Secondary structure (Cloverleaf model)
>W1910547268	Ala	CGC
                   c      Atcg cgatttctct
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      C     C T A G       C G G G G     C
      G     | | | |                 T T
      G     G A T C
        C A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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