The detailed information of tRNA gene sequence


Sequence ID>W1910547275
Genome IDFZNQ01000010
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 50491
End posion on genome 50406
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
accgatgcgT
tRNA gene sequence 
GCGAGGGTAGCCAAGCCCGGAAACGGCGGCGGACTCAAGATCCGCTCCTGTAGAGGTCCG
TGGGTTCAAATCCCTCCCCTCGCATga
Downstream region at tRNA end position 
gtgcgtcacc
Secondary structure (Cloverleaf model)
>W1910547275	Leu	CAA
                   T      ATga gtgcgtcacc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      |   | | |     A
  C         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    A A A          G     TCCTGTAGAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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