The detailed information of tRNA gene sequence


Sequence ID>W1910547292
Genome IDFZNQ01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 13192
End posion on genome 13116
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgactatcat
tRNA gene sequence 
GCTCCTGGAGTCCCCGTTGGCGAGGGACGCCAGCCTTTCGAGCTGGAGGTCGGGGGTTCA
ATTCCCCTCGGGAGCACtt
Downstream region at tRNA end position 
cggaatcgat
Secondary structure (Cloverleaf model)
>W1910547292	Glu	TTC
                   t      ACtt cggaatcgat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    G     T C C C C     A
    T G C C        A      + | | | |     A
  T         C C T G       G G G G G     C
  G         | | | |                 T T
  G         G G A C
    C G A G        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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