The detailed information of tRNA gene sequence


Sequence ID>W1910547812
Genome IDFZOC01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHumidesulfovibrio mexicanus DSM 13116 [FZOC]
Start position on genome 77511
End posion on genome 77601
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgacctcgc
tRNA gene sequence 
GGAGAGGTGTCCGAGTTGGCCTAAGGAGCACGCCTGGAAAGTGTGTGTACCCTAACGGGT
ACCGGAGGTTCGAATCCTCTCCTCTCCGCCA
Downstream region at tRNA end position 
ctttttcaat
Secondary structure (Cloverleaf model)
>W1910547812	Ser	GGA
                   c      GCCA ctttttcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
    T T G A        G      + | | | |     G
  G         G C C T       G G A G G     C
  G           | | |                 T T
  C         A G G A
    C T A          G     TGTACCCTAACGGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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