The detailed information of tRNA gene sequence


Sequence ID>W1910568760
Genome IDJFZT01000039
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 54404
End posion on genome 54309
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttctaattT
tRNA gene sequence 
GCGGGAGTGCCCGAGCGGACCAAGGGGGCGGACTCAAGGCCTGTAAGATATCCGCTGGCG
AAGGCCATCCGGGGTTCAAATCCCCGCTCCCGCAAac
Downstream region at tRNA end position 
taagaataag
Secondary structure (Cloverleaf model)
>W1910568760	Leu	CAA
                   T      AAac taagaataag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G C C C C     A
      C G A        G      | | | | |     A
    G       G C C C       C G G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        G     AAGATATCCGCTGGCGAAGGCCATC
                    G + T
                    C - G
                    G + T
                    G - C
                    A   C
                  C       G
                  T       G *
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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