The detailed information of tRNA gene sequence


Sequence ID>W1910568766
Genome IDJFZT01000045
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 49080
End posion on genome 48988
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
taaccctaat
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGGAGAGCGACGGGCTCTTAACCGCTATAGAGGGATACCCGT
AGGTCCCGGGTTCGAATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
catctcattc
Secondary structure (Cloverleaf model)
>W1910568766	Lys	CTT
                   t      GCCA catctcattc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       T T C G       C C G G G     C
    A       + | | |                 T T
    G       G A G C
      G G A        G     ATAGAGGGATACCCGTAGGTC
                    A - T
                    C   C
                    G   G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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