The detailed information of tRNA gene sequence


Sequence ID>W1910568806
Genome IDJGVM01000022
Search identical group
Phylum/ClassThermotogota
SpeciesPetrotoga sp. HKA.pet.4.5 [JGVM]
Start position on genome 27932
End posion on genome 28008
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattacttgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
tttgttatat
Secondary structure (Cloverleaf model)
>W1910568806	Met	CAT
                   g      ACCA tttgttatat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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