The detailed information of tRNA gene sequence


Sequence ID>W1910568928
Genome IDJHUK01000003
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Phytoplasma oryzae oryzae NGS-S10 [JHUK]
Start position on genome 6863
End posion on genome 6772
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttctaaata
tRNA gene sequence 
GGAGGAATACTCAAGTGGTCGAAGAGGCATGTTTGGAAAATATGTAGATCTTTAAAAAAG
ATGCAAGGGTTCGAATCCCTTTTCTTCCGCCA
Downstream region at tRNA end position 
ttttttaaaa
Secondary structure (Cloverleaf model)
>W1910568928	Ser	GGA
                   a      GCCA ttttttaaaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     A - T          T A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       A A G G G     C
    G         | | |                 T T
    T       A G A G
      C G A        G     TAGATCTTTAAAAAAGATGC
                    C - G
                    A - T
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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