The detailed information of tRNA gene sequence


Sequence ID>W1910570409
Genome IDJJPO01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei 3.H.A.2.1 [JJPO]
Start position on genome 10607
End posion on genome 10684
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gatgcgatgt
tRNA gene sequence 
GCTCCGGTAGTGTAGTCCGGCCAATCATTCCGGCCTTTCGAGCCGAAGACTCGGGTTCGA
ATCCCGGCCGGAGCACCA
Downstream region at tRNA end position 
aattattttc
Secondary structure (Cloverleaf model)
>W1910570409	Glu	TTC
                   t      ACCA aattattttc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      + | | | |     G
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     AGAC
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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